CodeEntropy.levels.nodes package

Submodules

• CodeEntropy.levels.nodes.accumulators module
  • CovarianceAccumulators
    • CovarianceAccumulators.force_covariances
    • CovarianceAccumulators.forcetorque_counts
    • CovarianceAccumulators.forcetorque_covariances
    • CovarianceAccumulators.frame_counts
    • CovarianceAccumulators.torque_covariances
  • GroupIndex
    • GroupIndex.group_id_to_index
    • GroupIndex.index_to_group_id
  • InitCovarianceAccumulatorsNode
    • InitCovarianceAccumulatorsNode.run()
• CodeEntropy.levels.nodes.axes_topology module
  • AxesTopology
    • AxesTopology.residue
    • AxesTopology.ua
  • BuildAxesTopologyNode
    • BuildAxesTopologyNode.run()
  • ResidueAxesTopology
    • ResidueAxesTopology.has_neighbor_bonds
    • ResidueAxesTopology.residue_heavy_indices
    • ResidueAxesTopology.residue_ua_masses
  • UAAxesTopology
    • UAAxesTopology.bonded_heavy_indices
    • UAAxesTopology.bonded_light_indices
    • UAAxesTopology.heavy_atom_index
    • UAAxesTopology.residue_heavy_indices
    • UAAxesTopology.residue_ua_masses
    • UAAxesTopology.ua_all_atom_indices
    • UAAxesTopology.ua_atom_indices
• CodeEntropy.levels.nodes.beads module
  • BuildBeadsNode
    • BuildBeadsNode.run()
  • UnitedAtomBead
    • UnitedAtomBead.atom_indices
    • UnitedAtomBead.residue_id
• CodeEntropy.levels.nodes.covariance module
  • FrameCovarianceNode
    • FrameCovarianceNode.run()
• CodeEntropy.levels.nodes.detect_levels module
  • DetectLevelsNode
    • DetectLevelsNode.run()
• CodeEntropy.levels.nodes.detect_molecules module
  • DetectMoleculesNode
    • DetectMoleculesNode.run()

Module contents