Index

_

__init__() (CodeEntropy.ClassCollection.DataContainer.DataContainer method) (CodeEntropy.ClassCollection.PoseidonClass.Poseidon method) (CodeEntropy.ClassCollection.PoseidonClass.Poseidon_mp method)

C

compute_entropy_residue_level() (in module CodeEntropy.FunctionCollection.EntropyFunctions) compute_entropy_UA_level() (in module CodeEntropy.FunctionCollection.EntropyFunctions) compute_entropy_UA_level_multiprocess() (in module CodeEntropy.FunctionCollection.EntropyFunctions) compute_entropy_whole_molecule_level() (in module CodeEntropy.FunctionCollection.EntropyFunctions)

compute_topographical_entropy0_BB() (in module CodeEntropy.FunctionCollection.EntropyFunctions) compute_topographical_entropy0_SC() (in module CodeEntropy.FunctionCollection.EntropyFunctions) compute_topographical_entropy1_BB() (in module CodeEntropy.FunctionCollection.EntropyFunctions) compute_topographical_entropy1_SC() (in module CodeEntropy.FunctionCollection.EntropyFunctions) compute_topographical_entropy_AEM() (in module CodeEntropy.FunctionCollection.EntropyFunctions)

D

DataContainer (class in CodeEntropy.ClassCollection.DataContainer)

N

new_U_select_atom() (in module CodeEntropy.IO.MDAUniverseHelper)

new_U_select_frame() (in module CodeEntropy.IO.MDAUniverseHelper)

P

Poseidon (class in CodeEntropy.ClassCollection.PoseidonClass)

Poseidon_mp (class in CodeEntropy.ClassCollection.PoseidonClass)

R

read_universe() (in module CodeEntropy.IO.MDAUniverseHelper)

run_analysis() (CodeEntropy.ClassCollection.PoseidonClass.Poseidon method) (CodeEntropy.ClassCollection.PoseidonClass.Poseidon_mp method)

W

write_universe() (in module CodeEntropy.IO.MDAUniverseHelper)